transcriptome st data (10X Genomics)

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10X Genomics transcriptome st data
Transcriptome St Data, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/transcriptomics+st/data+st/pm42121254-153-2-14
Average 86 stars, based on 1 article reviews

transcriptome st data - by Bioz Stars, 2026-09

86/100 stars

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Spatial Transcriptomics:

Article Title: Pan-cancer single cell and spatial transcriptomics analysis deciphers the molecular landscapes of senescence related cancer-associated fibroblasts and reveals its predictive value in neuroblastoma via integrated multi-omics analysis and machine learning.
Article Snippet: .. To explore biological landscapes of CAFs in pan-cancer spatial transcriptomics (ST) resolution, we sourced ST slide data of various cancer types form 10x database (https://www.10xgenomics.com/cn/ frontiersin.org datasets), as well as GSE176078, GSE179572, GSE203612 and GSE181300 from GEO database. ..

Article Title: Spatial transcriptomics exploration of the primary neuroblastoma microenvironment unveils novel paracrine interactions
Article Snippet: .. Two sections were profiled from each tumor using the 10X Genomics Visium spatial transcriptomics (ST) platform, resulting in the analyses of 6 sections obtained from 3 different tumors ( ). ..

Article Title: Neoadjuvant vidutolimod and nivolumab in high-risk resectable melanoma: A prospective phase II trial.
Article Snippet: .. Correlative science: 10X Genomics Visium spatial transcriptomics (ST) Four FFPE blocks (2 MPR and 2 non-MPR) that demonstrated the different response and pathological features identified in this trial were selected for spatial transcriptomics with the 10X Genomics Visium Spatial Gene Expression Slide Kit (PN-1000185; 10X Genomics, Pleasanton, CA, USA) with v1 chemistry. ..

Article Title: An atlas of epithelial cell states and plasticity in lung adenocarcinoma
Article Snippet: .. Fourth, we performed spatial transcriptomics (ST) analysis using the Visium platform from 10X Genomics of a human KM-LUAD (P14; Fig. 2j) and mouse tumour-bearing lungs from multiple mice (Fig. 3f and Extended Data Fig. 6h-j) and not only confirmed the in situ presence of KACs (histologically annotated as reactive pneumocytes) in normal-appearing regions surrounding tumours, but also found that both human and mouse KACs, like their nearby tumours, displayed enrichment for KRAS and KAC signatures (Fig. 2j and Fig. 3f and Extended Data Fig. 6h-j. ..

Article Title: Spatial Transcriptomic Analysis Identifies a SERPINA3 -Expressing Astrocytic State Associated with the Human Neuritic Plaque Microenvironment
Article Snippet: .. In this study, we sought to characterize the transcriptomic landscape within the neuritic plaque microenvironment using the 10x Genomics Visium Spatial Transcriptomics (ST) platform . ..

Article Title: Pan-cancer single cell and spatial transcriptomics analysis deciphers the molecular landscapes of senescence related cancer-associated fibroblasts and reveals its predictive value in neuroblastoma via integrated multi-omics analysis and machine learning
Article Snippet: .. To explore biological landscapes of CAFs in pan-cancer spatial transcriptomics (ST) resolution, we sourced ST slide data of various cancer types form 10x database ( https://www.10xgenomics.com/cn/datasets ), as well as GSE176078, GSE179572, GSE203612 and GSE181300 from GEO database. ..

Article Title: Integration of Elemental Imaging and Spatial Transcriptomic Profiling for Proof-of-Concept Metals-Based Pathway Analysis of Colon Tumor Microenvironment
Article Snippet: .. We utilized the 10X Genomics Visium CytAssist spatial transcriptomics (ST) assay for in-depth profiling of a tissue section . .. The preparation of FFPE tissue sections involved several steps: firstly, placing the sections on standard histology slides, coverslipping in glycerol + xylene medium, followed by deparaffinization, rehydration, and H&E staining using a Sakura Tissue- Tek Prisma Stainer (Sakura Finetek USA, Inc. 1750 West 214th Street, Torrance, CA 90501).

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Article Title: Theme 2 Genetics and Genomics.
Article Snippet: Amyotrophic Lateral Sclerosis and Frontotemporal

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